PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT33773
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 353aa    MW: 40026 Da    PI: 8.269
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT33773genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.41e-30111381127
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvka..eekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlsk.k 96 
               lppG++F P+++el+v+yL++k++g + +l  ++++v  i+++ P+++  +++   e  +wyfF+kr +kyatg+r+ r+t  +g+Wkatg  +e+  + +
  EMT33773  11 LPPGYHFAPSEDELIVHYLRPKLDGLPPHL-PIFNDVtPITDYRPEKITDEFRDfgEGARWYFFTKRTRKYATGSRPDRTTPgKGFWKATGPVREIPIRpG 110
               79*************************998.66777768*********85444433667********************77659************98879 PP

       NAM  97 gelvglkktLvfykgrapkgektdWvmheyr 127
               g+lvg  +tLvfy+g ++    t+W+m ey+
  EMT33773 111 GKLVGRARTLVFYTGPDEP---THWTMYEYE 138
               999**********766555...9*******7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.72E-376168IPR003441NAC domain
PROSITE profilePS5100539.85211169IPR003441NAC domain
PfamPF023655.9E-1912138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MEGKQRVLLN LPPGYHFAPS EDELIVHYLR PKLDGLPPHL PIFNDVTPIT DYRPEKITDE  60
FRDFGEGARW YFFTKRTRKY ATGSRPDRTT PGKGFWKATG PVREIPIRPG GKLVGRARTL  120
VFYTGPDEPT HWTMYEYENE NRTSEAEAEA NDKNIDKLGE WVLCTIQKSQ RCDVKKKAGG  180
KAKGKAGGRK RKGKAQSGAD LVQIQSAEVP ETAWPEKGDE TYVFDDLEQT GRSRKRPQMQ  240
QHEPPRSETM MVDDYDYNGI QYIWDDEYMP MPPPLEYEVA PPVAGVGYSY NSMMYQPATS  300
YLHAAHYAVE QDGYAGGHLG GLLGTGNIPC NYLAGQCPLP HRAGLSRRRR RNH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-22917013169Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174191KKKAGGKAKGKAGGRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010230150.11e-54PREDICTED: uncharacterized protein LOC104582366
TrEMBLN1R4P30.0N1R4P3_AEGTA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP158671313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.27e-25NAC domain containing protein 47